Delphi.science

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226 records

  1. Can a self-sustaining chemical network emerge due to just a few catalysts?

    Jinsu Kim, Ercan Sönmez

    arXivSource: arxiv.orgNov 4, 2026q-bio.MNscore 0

  2. Discrete Backbone Elasticity and Curvature-Dependent Torsion Statistics in Proteins

    Yiquan Wang, Mingyu Bian, Jiayuan Ma

    arXivSource: arxiv.orgNov 4, 2026q-bio.BMscore 0

  3. Basic Reproductive Numbers in Host-Parasite Systems with Demographic Bistability

    Carli Peterson, Erika Gallo, Christopher Kribs

    arXivSource: arxiv.orgNov 3, 2026q-bio.PEscore 0

  4. A Planar Switching Neuron Shares Logarithmic First-Spike Latency with Its Three-Dimensional Parent But Not Its Onset Mechanism

    Giorgio Sonnino, Vadim Shlyonskiy, Thomas Erneux, David Gall

    arXivSource: arxiv.orgNov 1, 2026q-bio.NCscore 0

  5. An extension of the classic Buneman theorem from phylogenetic trees to networks

    Mirko Wilde, Mareike Fischer

    arXivSource: arxiv.orgOct 30, 2026q-bio.PEscore 0

  6. How timing and mode of selection shape ancestral genetic contributions

    Juan Mardomingo-Sanz, Raphaël Tran-Thanh, Camille Coron, Diala Abu Awad

    arXivSource: arxiv.orgOct 30, 2026q-bio.PEscore 0

  7. Basis statistics for phylogenetic tree shape: tree balance formulas beyond expectations

    Daniel J. Bauman, Noah A. Rosenberg

    arXivSource: arxiv.orgOct 29, 2026q-bio.PEscore 0

  8. Linked-site block laws of all lengths identify the collapsed mutation-scaled genealogy

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  9. A kernel-checked implementation of the biallelic two-locus sampling recursion, and a table checker

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  10. A prespecified betting test of panmixia against a two-deme history: size and power

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  11. The Ewens sampling formula and its generative urn

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  12. An explicit block-recursive formula for solutions of the two-locus sampling recursion

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  13. Mean and variance of segregating sites, Watterson's estimator, and pairwise differences under Kingman's coalescent

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  14. Combinatorics and probabilities of Kingman coalescent trees: histories, shapes, topologies, root splits, Colless, and Sackin

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  15. Neutral fixation probability in exchangeable (Cannings) models

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  16. A partition-pair decomposition of the two-locus sampling probability with Ewens marginals

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  17. The two-locus sampling recursion of the coalescent with recombination: existence, uniqueness, and probabilistic interpretation

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  18. Seven linked sites separate a two-island history from every panmictic history

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  19. Total variation bound between an unpruned ancestral recombination process and SMC' on pairwise coalescence times

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  20. Tajima's D under Kingman's coalescent: moments of the numerator, the variance estimate, and the expected spectrum

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  21. When one finite block of linked sites separates a three-sample genealogy from every panmictic history

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  22. Classical identities and a limit theorem of selection theory

    X. Lee, N. Volkov

    Palomar RegistrySource: github.comOct 29, 2026q-bio.PEmachine-checkedscore 0

  23. Diagnosing parameter unidentifiability in stochastic dynamics with an application to flocking models

    Natsuki Kurita, Hiroshi Kori

    arXivSource: arxiv.orgOct 28, 2026q-bio.QMscore 0

  24. Spontaneous Spirals in Spatial Systems

    Wim Hordijk

    arXivSource: arxiv.orgOct 28, 2026q-bio.MNscore 0

  25. Exploring Neural Dynamics with Time Delays: A Numerical and Bifurcation Analysis Approach

    Martin R Nelson, Jonathan J Crofts

    arXivSource: arxiv.orgOct 27, 2026q-bio.NCscore 0

  26. Every route counts, but some count more: a max-plus view of the C. elegans brain

    Emma Reyner-Fuentes, Sebastian Rudolph, Carmen Peláez-Moreno, Francisco J. Valverde-Albacete

    arXivSource: arxiv.orgOct 27, 2026q-bio.NCscore 0

  27. Phase response approach to networked neural activity models with delays

    Martin R Nelson, Jonathan J Crofts

    arXivSource: arxiv.orgOct 26, 2026q-bio.NCscore 0

  28. Dynamics of a Harvested Predator-Prey Model with a Generalized Holling Type~III Response Capturing Group Defense

    Wael El Khateeb, Farjana Akter, Chanaka Kottegoda, Muner Mustafa Abou Hasan

    arXivSource: arxiv.orgOct 23, 2026q-bio.PEscore 0

  29. Stochastic predator-prey compartment model with cyclic and non-cyclic transition pathways and mortality

    Thomas M. Michelitsch, Ayten D. Baher, Michael Bestehorn, Andrzej F. Nowakowski, Alejandro P. Riascos, Bernard A. Collet

    arXivSource: arxiv.orgOct 23, 2026q-bio.PEscore 0

  30. From Turing Patterns to Spike Self-Replication and Nucleation in a Growing-Domain Tulip Breaking Virus Model

    Fanya Xia, Chunyi Gai

    arXivSource: arxiv.orgOct 22, 2026q-bio.PEscore 0

  31. Dynamics of random recurrent neural networks: colored noise and sublinear activations

    German Mato, Facundo Rigatuso, Gonzalo Torroba

    arXivSource: arxiv.orgOct 22, 2026q-bio.NCscore 0

  32. How Claude designed protein binders against scorpion neurotoxins

    Anthropic

    Anthropic ScienceSource: anthropic.comOct 20, 2026q-bio.BMscore 0

  33. The resource cost of cooperative invasion

    Abhishek Chowdhury

    arXivSource: arxiv.orgOct 19, 2026q-bio.PEscore 0

  34. Simulation-free approximate Bayesian computation for stochastic reaction networks

    Zekai Li, Mauricio Barahona, Philipp Thomas

    arXivSource: arxiv.orgOct 19, 2026q-bio.QMscore 0

  35. Multiscale Quantum-Classical Simulation of Protein Autoproteolysis in a Million-Atom Membrane Environment

    Alexander Orlov, Alexis Ralli, Tim Weaving, Michael Williams de la Bastida, Reuben Martin, Zohim Chandani, Minh Chung, P. V. Sriluckshmy

    arXivSource: arxiv.orgOct 16, 2026q-bio.BMscore 0

  36. The nearest neighbor interchange proximity measure for the tree-basedness of rooted binary phylogenetic networks

    Martin Frohn, Takatora Suzuki

    arXivSource: arxiv.orgOct 16, 2026q-bio.PEscore 0

  37. Statistical Mechanics of Spike Trains: Self-Consistent Activity Ensembles and Phase Transitions

    Jan Pyrzowski, Laura Messio, Guillaume Marrelec, Marcin Markiewicz

    arXivSource: arxiv.orgOct 14, 2026q-bio.NCscore 0

  38. The influence of decay in dynamic models of gene regulatory networks

    Oleksandr Pokutnyi, Felix Sadyrbaev

    arXivSource: arxiv.orgOct 13, 2026q-bio.MNscore 0

  39. Physiology-Informed Sparse Identification of Dynamic Crop Models

    Corné Verburg, Alexander Heinlein, Fred van Eeuwijk, Neil Budko

    arXivSource: arxiv.orgOct 12, 2026q-bio.PEscore 0

  40. Tree-based Algorithms for Breakpoint Median and Near-Median Genomes

    Poly H. da Silva, Arash Jamshidpey, David Sankoff

    arXivSource: arxiv.orgOct 12, 2026q-bio.GNscore 0

  41. Temporal invariance of evolutionary entropy and comparative demographic analysis

    Jorge Buescu, Henrique M. Oliveira

    arXivSource: arxiv.orgOct 11, 2026q-bio.PEscore 0

  42. A minimal model for rate-induced tipping to extinction

    Brian Hennessy, Nikola Popović, Zak Sattar

    arXivSource: arxiv.orgOct 8, 2026q-bio.PEscore 0

  43. Encoding level-3 semi-directed phylogenetic networks by quarnets and quinnets

    Niels Holtgrefe, Katharina T. Huber, Leo van Iersel, Vincent Moulton

    arXivSource: arxiv.orgOct 6, 2026q-bio.PEscore 0

  44. Identifiability of a linear dynamical reaction-diffusion system with directed interactions from the second-order statistics of a single snapshot

    Pirmin Schlicke

    arXivSource: arxiv.orgOct 5, 2026q-bio.QMscore 0

  45. Approximating Parameter Regions for Multistationarity and Multistability in Mass-Action Systems

    Dylan Antonio S. J. Talabis, Victoria May P. Mendoza, Bryan S. Hernandez

    arXivSource: arxiv.orgOct 4, 2026q-bio.QMscore 0

  46. Identifying the rooted species tree from unrooted gene trees under the coalescent

    The-Anh Vu-Le

    Palomar RegistrySource: github.comOct 4, 2026q-bio.PEmachine-checkedscore 0

  47. Stability of Phase-locked States of Weakly Coupled Izhikevich Neurons

    XinYe Cheng, Sue Ann Campbell

    arXivSource: arxiv.orgOct 2, 2026q-bio.NCscore 0

  48. A two-reaction counterexample to the gross-amplification affinity bound

    Michael Mislan

    Palomar RegistrySource: github.comOct 1, 2026q-bio.MNmachine-checkedscore 0

  49. A Stage-Structured Deterministic Model of Fall Armyworm Infestation on Maize Farming

    Donald Okoth Ojwang, Mamadou Pathe Ly, Shaibu Osman

    arXivSource: arxiv.orgSep 30, 2026q-bio.PEscore 0

  50. Stochastic dynamics and synchronization in motif-based neuronal networks

    Gurpreet Jagdev, Yifei Lu, Richard Bertram, Na Yu

    arXivSource: arxiv.orgSep 30, 2026q-bio.NCscore 0